1. Kamerkar S, LeBleu VS, Sugimoto H, Yang S, Ruivo CF, Melo SA, Lee JJ, Kalluri R

Exosomes facilitate therapeutic targeting of oncogenic KRAS in pancreatic cancer. Nature 546: 498-503, 2017.  [Article] 

 doi: 10.1038/nature22341 PMID: 28607485.

 

2. Sousa N, Fautino C, Aguas LMN, Freire J, Coutinho C, Fautino I, Capela A, Costa T, Costa ASA, Coelho S, Pereira F, Abreu SC, Rolo AS, Albergaria A, Lima J, Wen XG, Mesquita C, Dias CC, Azevedo LF, Carneiro F

Homologous recombination deficiency as prognostic marker in metastatic gastric cancer. Journal of Clinical Oncology 37: ., 2019.  [Meeting Abstract] 

 doi: 10.1200/JCO.2019.37.15_suppl.4040.

 

3. Werkstetter KJ, Korponay-Szabó IR, Popp A, Villanacci V, Salemme M, Heilig G, Lillevang ST, Mearin ML, Ribes-Koninckx C, Thomas A, Troncone R, Filipiak B, Mäki M, Gyimesi J, Najafi M, Dolinšek J, Dydensborg Sander S, Auricchio R, Papadopoulou A, Vécsei A, Szitanyi P, Donat E, Nenna R, Alliet P, Penagini F, Garnier-Lengliné H, Castillejo G, Kurppa K, Shamir R, Hauer AC, Smets F, Corujeira S, van Winckel M, Buderus S, Chong S, Husby S, Koletzko S, ProCeDE study group S

Accuracy in Diagnosis of Celiac Disease Without Biopsies in Clinical Practice. Gastroenterology 153: 924-935, 2017.  [Article] 

 doi: 10.1053/j.gastro.2017.06.002 PMID: 28624578.

 

4. Magro F, Lopes J, Borralho P, Lopes S, Coelho R, Cotter J, Castro FD, Sousa HT, Salgado M, Andrade P, Vieira AI, Figueiredo P, Caldeira P, Sousa A, Duarte MA, Ávila F, Silva J, Moleiro J, Mendes S, Giestas S, Ministro P, Sousa P, Gonçalves R, Gonçalves B, Oliveira A, Rosa I, Rodrigues M, Chagas C, Dias CC, Afonso J, Geboes K, Carneiro F, Portuguese IBD Study Group (GEDII) F

Comparison of different histological indexes in the assessment of UC activity and their accuracy regarding endoscopic outcomes and faecal calprotectin levels. Gut 68: 594-603, 2019.  [Article] 

 doi: 10.1136/gutjnl-2017-315545 PMID: 29437913.

 

5. Malfertheiner P, Megraud F, O'Morain CA, Gisbert JP, Kuipers EJ, Axon AT, Bazzoli F, Gasbarrini A, Atherton J, Graham DY, Hunt R, Moayyedi P, Rokkas T, Rugge M, Selgrad M, Suerbaum S, Sugano K, El-Omar EM, European Helicobacter and Microbiota Study Group and Consensus panel EM

Management of Helicobacter pylori infection-the Maastricht V/Florence Consensus Report. Gut 66: 6-30, 2017.  [Article] 

 doi: 10.1136/gutjnl-2016-312288 PMID: 27707777.

 

6. Ferreira RM, Pereira-Marques J, Pinto-Ribeiro I, Costa JL, Carneiro F, Machado JC, Figueiredo C

Gastric microbial community profiling reveals a dysbiotic cancer-associated microbiota. Gut 67: 226-236, 2018.  [Article] 

 doi: 10.1136/gutjnl-2017-314205 PMID: 29102920.

 

7. Baldaque-Silva F, Marques M, Lopes J, Carneiro F, Vieth M, Macedo G

Crypt dysplasia on Barrett's oesophagus. Gut 63: 528-9, 2014.  [Letter] 

 doi: 10.1136/gutjnl-2013-305278 PMID: 23812321.

 

8. Stjepanovic N, Moreira L, Carneiro F, Balaguer F, Cervantes A, Balmana J, Martinelli E

Hereditary gastrointestinal cancers: ESMO Clinical Practice Guidelines for diagnosis, treatment and follow-up Annals of oncology : official journal of the European Society for Medical Oncology / ESMO 30: 1558-1571, 2019.  [Article] 

 doi: 10.1093/annonc/mdz233.

 

9. Maqueda MA, Ruiz F, Landolfi S, Viaplana C, Miquel JM, Jimenez J, Diez M, Gullo I, Mirallas O, Tabernero J, Carneiro F, Nuciforo PG, Vivancos A, Dienstmann R

Molecular subtypes of metastatic (met) gastric cancer (GC) (MoTriGastric): New biomarkers closer to the clinics Annals of oncology : official journal of the European Society for Medical Oncology 30: ., 2019.  [Meeting Abstract] 

.

 

10. Alsina M, Gullo I, Carneiro F

Intratumoral heterogeneity in gastric cancer: a new challenge to face. Annals of oncology : official journal of the European Society for Medical Oncology 28: 912-913, 2017.  [Editorial Material] 

 doi: 10.1093/annonc/mdx134 PMID: 28368465.

 

11. Rigoutsos I, Lee SK, Nam SY, Anfossi S, Pasculli B, Pichler M, Jing Y, Rodriguez-Aguayo C, Telonis AG, Rossi S, Ivan C, Catela Ivkovic T, Fabris L, Clark PM, Ling H, Shimizu M, Redis RS, Shah MY, Zhang X, Okugawa Y, Jung EJ, Tsirigos A, Huang L, Ferdin J, Gafà R, Spizzo R, Nicoloso MS, Paranjape AN, Shariati M, Tiron A, Yeh JJ, Teruel-Montoya R, Xiao L, Melo SA, Menter D, Jiang ZQ, Flores ER, Negrini M, Goel A, Bar-Eli M, Mani SA, Liu CG, Lopez-Berestein G, Berindan-Neagoe I, Esteller M, Kopetz S, Lanza G, Calin GA

N-BLR, a primate-specific non-coding transcript leads to colorectal cancer invasion and migration. Genome biology 18: 98, 2017.  [Article] 

 doi: 10.1186/s13059-017-1224-0 PMID: 28535802.

 

12. Chacón-Duque JC, Adhikari K, Fuentes-Guajardo M, Mendoza-Revilla J, Acuña-Alonzo V, Barquera R, Quinto-Sánchez M, Gómez-Valdés J, Everardo Martínez P, Villamil-Ramírez H, Hünemeier T, Ramallo V, Silva de Cerqueira CC, Hurtado M, Villegas V, Granja V, Villena M, Vásquez R, Llop E, Sandoval JR, Salazar-Granara AA, Parolin ML, Sandoval K, Peñaloza-Espinosa RI, Rangel-Villalobos H, Winkler CA, Klitz W, Bravi C, Molina J, Corach D, Barrantes R, Gomes V, Resende C, Gusmão L, Amorim A, Xue Y, Dugoujon JM, Moral P, González-José R, Schuler-Faccini L, Salzano FM, Bortolini MC, Canizales-Quinteros S, Poletti G, Gallo C, Bedoya G, Rothhammer F, Balding D, Hellenthal G, Ruiz-Linares A

Latin Americans show wide-spread Converso ancestry and imprint of local Native ancestry on physical appearance. Nature communications 9: 5388, 2018.  [Article] 

 doi: 10.1038/s41467-018-07748-z PMID: 30568240.

 

13. Silva-Gomes S, Santos AG, Caldas C, Silva CM, Neves JV, Lopes J, Carneiro F, Rodrigues PN, Duarte TL

Transcription factor NRF2 protects mice against dietary iron-induced liver injury by preventing hepatocytic cell death. Journal of hepatology 60: 354-61, 2014.  [Article] 

 doi: 10.1016/j.jhep.2013.09.004 PMID: 24021424.

 

14. Baglio SR, Lagerweij T, Pérez-Lanzón M, Ho XD, Léveillé N, Melo SA, Cleton-Jansen AM, Jordanova ES, Roncuzzi L, Greco M, van Eijndhoven MAJ, Grisendi G, Dominici M, Bonafede R, Lougheed SM, de Gruijl TD, Zini N, Cervo S, Steffan A, Canzonieri V, Martson A, Maasalu K, Köks S, Wurdinger T, Baldini N, Pegtel DM

Blocking Tumor-Educated MSC Paracrine Activity Halts Osteosarcoma Progression. Clinical cancer research : an official journal of the American Association for Cancer Research 23: 3721-3733, 2017.  [Article] 

 doi: 10.1158/1078-0432.CCR-16-2726 PMID: 28053020.

 

15. Fernandes MT, Dejardin E, Dos Santos NR

Context-dependent roles for lymphotoxin-ß receptor signaling in cancer development. BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER 1865: 204-19, 2016.  [Review] 

 doi: 10.1016/j.bbcan.2016.02.005 PMID: 26923876.

 

16. Ruivo CF, Adem B, Silva M, Melo SA

The Biology of Cancer Exosomes: Insights and New Perspectives. Cancer research 77: 6480-6488, 2017.  [Review] 

 doi: 10.1158/0008-5472.CAN-17-0994 PMID: 29162616.

 

17. Li J, Woods SL, Healey S, Beesley J, Chen X, Lee JS, Sivakumaran H, Wayte N, Nones K, Waterfall JJ, Pearson J, Patch AM, Senz J, Ferreira MA, Kaurah P, Mackenzie R, Heravi-Moussavi A, Hansford S, Lannagan TR, Spurdle AB, Simpson PT, da Silva L, Lakhani SR, Clouston AD, Bettington M, Grimpen F, Busuttil RA, Di Costanzo N, Boussioutas A, Jeanjean M, Chong G, Fabre A, Olschwang S, Faulkner GJ, Bellos E, Coin L, Rioux K, Bathe OF, Wen X, Martin HC, Neklason DW, Davis SR, Walker RL, Calzone KA, Avital I, Heller T, Koh C, Pineda M, Rudloff U, Quezado M, Pichurin PN, Hulick PJ, Weissman SM, Newlin A, Rubinstein WS, Sampson JE, Hamman K, Goldgar D, Poplawski N, Phillips K, Schofield L, Armstrong J, Kiraly-Borri C, Suthers GK, Huntsman DG, Foulkes WD, Carneiro F, Lindor NM, Edwards SL, French JD, Waddell N, Meltzer PS, Worthley DL, Schrader KA, Chenevix-Trench G

Point Mutations in Exon 1B of APC Reveal Gastric Adenocarcinoma and Proximal Polyposis of the Stomach as a Familial Adenomatous Polyposis Variant. American journal of human genetics 98: 830-42, 2016.  [Article] 

 doi: 10.1016/j.ajhg.2016.03.001 PMID: 27087319.

 

18. Pinto ML, Rios E, Silva AC, Neves SC, Caires HR, Pinto AT, Durães C, Carvalho FA, Cardoso AP, Santos NC, Barrias CC, Nascimento DS, Pinto-do-Ó P, Barbosa MA, Carneiro F, Oliveira MJ

Decellularized human colorectal cancer matrices polarize macrophages towards an anti-inflammatory phenotype promoting cancer cell invasion via CCL18. Biomaterials 124: 211-224, 2017.  [Article] 

 doi: 10.1016/j.biomaterials.2017.02.004 PMID: 28209528.

 

19. Branco da Cunha C, Klumpers DD, Koshy ST, Weaver JC, Chaudhuri O, Seruca R, Carneiro F, Granja PL, Mooney DJ

CD44 alternative splicing in gastric cancer cells is regulated by culture dimensionality and matrix stiffness. Biomaterials 98: 152-62, 2016.  [Article] 

 doi: 10.1016/j.biomaterials.2016.04.016 PMID: 27187279.

 

20. Castro-Vale I, van Rossum EF, Machado JC, Mota-Cardoso R, Carvalho D

Genetics of glucocorticoid regulation and posttraumatic stress disorder--What do we know? Neuroscience and biobehavioral reviews 63: 143-57, 2016.  [Review] 

 doi: 10.1016/j.neubiorev.2016.02.005 PMID: 26872620.

 

21. Magro F, Lopes S, Silva M, Coelho R, Portela F, Branquinho D, Correia L, Fernandes S, Cravo M, Caldeira P, Sousa HT, Patita M, Lago P, Ramos J, Afonso J, Redondo I, Machado P, Cornillie F, Lopes J, Carneiro F, Portuguese IBD Group [GEDII] F

Low Golimumab Trough Levels at Week 6 Are Associated With Poor Clinical, Endoscopic and Histological Outcomes in Ulcerative Colitis Patients: Pharmacokinetic and Pharmacodynamic Sub-analysis of the Evolution Study. Journal of Crohn's & colitis 13: 1387-1393, 2019.  [Article] 

 doi: 10.1093/ecco-jcc/jjz071 PMID: 30989180.

 

22. Magro F, Lopes S, Silva M, Coelho R, Portela F, Branquinho D, Correia L, Fernandes S, Cravo M, Caldeira P, Sousa H, Patita M, Lago P, Ramos J, Afonso J, Redondo I, Machado P, Philip G, Lopes J, Carneiro F

Correlation between soluble suppression of tumorigenicity 2 (sST2) and endoscopic activity in patients with moderate to severe ulcerative colitis under golimumab treatment: results of the EVOLUTION study Journal of Crohn's & colitis 13: S363-S363, 2019.  [Meeting Abstract] 

.

 

23. Santos LR, Durães C, Ziros PG, Pestana A, Esteves C, Neves C, Carvalho D, Bongiovanni M, Renaud CO, Chartoumpekis DV, Habeos IG, Simões MS, Soares P, Sykiotis GP

Interaction of Genetic Variations in NFE2L2 and SELENOS Modulates the Risk of Hashimoto's Thyroiditis. Thyroid : official journal of the American Thyroid Association 29: 1302-1315, 2019.  [Article] 

 doi: 10.1089/thy.2018.0480 PMID: 31426718.

 

24. Melo CA, Léveillé N, Rooijers K, Wijchers PJ, Geeven G, Tal A, Melo SA, de Laat W, Agami R

A p53-bound enhancer region controls a long intergenic noncoding RNA required for p53 stress response. Oncogene 35: 4399-406, 2016.  [Article] 

 doi: 10.1038/onc.2015.502 PMID: 26776159.

 

25. Botelho MC, Alves H, Barros A, Rinaldi G, Brindley PJ, Sousa M

The role of estrogens and estrogen receptor signaling pathways in cancer and infertility: the case of schistosomes. Trends in parasitology 31: 246-50, 2015.  [Review] 

 doi: 10.1016/j.pt.2015.03.005 PMID: 25837311.

 

26. Gullo I, Devezas V, Baptista M, Garrido L, Castedo S, Morais R, Wen X, Rios E, Pinheiro J, Pinto-Ribeiro I, Ferreira RM, Preto J, Santos-Antunes J, Marques M, Campos M, Almeida F, Espinheira MDC, Amil Dias J, Figueiredo C, Oliveira C, Trindade E, Carneiro F

Phenotypic heterogeneity of hereditary diffuse gastric cancer: report of a family with early-onset disease. Gastrointestinal endoscopy 87: 1566-1575, 2018.  [Article] 

 doi: 10.1016/j.gie.2018.02.008 PMID: 29454568.

 

27. Baraniskin A, Van Laethem JL, Wyrwicz L, Guller U, Wasan HS, Matysiak-Budnik T, Gruenberger T, Ducreux M, Carneiro F, Van Cutsem E, Seufferlein T, Schmiegel W

Clinical relevance of molecular diagnostics in gastrointestinal (GI) cancer: European Society of Digestive Oncology (ESDO) expert discussion and recommendations from the 17th European Society for Medical Oncology (ESMO)/World Congress on Gastrointestinal Cancer, Barcelona. European journal of cancer (Oxford, England : 1990) 86: 305-317, 2017.  [Review] 

 doi: 10.1016/j.ejca.2017.09.021 PMID: 29065378.

 

28. Machado JC, Reis J, Fernandes M, Silva R, Cirnes L, Carneiro F, Costa JL

Tumor-specific neoantigens drive T-cell clonotype convergence European journal of cancer (Oxford, England : 1990) 92: S11-S11, 2018.  [Meeting Abstract] 

.

 

29. Carneiro F

Hereditary gastric cancer. European journal of cancer (Oxford, England : 1990) 92 Suppl 2: S4, 2018.  [Meeting Abstract] 

 doi: 10.1016/j.ejca.2018.01.098 PMID: 29553392.

 

30. Vangala DB, Cauchin E, Balmaña J, Wyrwicz L, van Cutsem E, Güller U, Castells A, Carneiro F, Hammel P, Ducreux M, van Laethem JL, Matysiak-Budnik T, Schmiegel W

Screening and surveillance in hereditary gastrointestinal cancers: Recommendations from the European Society of Digestive Oncology (ESDO) expert discussion at the 20th European Society for Medical Oncology (ESMO)/World Congress on Gastrointestinal Cancer, Barcelona, June 2018. European journal of cancer (Oxford, England : 1990) 104: 91-103, 2018.  [Article] 

 doi: 10.1016/j.ejca.2018.09.004 PMID: 30342310.

 

31. Machado JC, Reis J, Fernandes M, Silva R, Cirnes L, Chaudhary R, Carneiro F, Costa JL

Determining tumor mutation load using an NGS-based, target gene panel European journal of cancer (Oxford, England : 1990) 92: S4-S5, 2018.  [Meeting Abstract] 

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32. Basturk O, Berger MF, Yamaguchi H, Adsay V, Askan G, Bhanot UK, Zehir A, Carneiro F, Hong SM, Zamboni G, Dikoglu E, Jobanputra V, Wrzeszczynski KO, Balci S, Allen P, Ikari N, Takeuchi S, Akagawa H, Kanno A, Shimosegawa T, Morikawa T, Motoi F, Unno M, Higuchi R, Yamamoto M, Shimizu K, Furukawa T, Klimstra DS

Pancreatic intraductal tubulopapillary neoplasm is genetically distinct from intraductal papillary mucinous neoplasm and ductal adenocarcinoma. Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 30: 1760-1772, 2017.  [Article] 

 doi: 10.1038/modpathol.2017.60 PMID: 28776573.

 

33. Magro F, Lopes S, Coelho R, Cotter J, Dias de Castro F, Tavares de Sousa H, Salgado M, Andrade P, Vieira AI, Figueiredo P, Caldeira P, Sousa A, Duarte MA, Ávila F, Silva J, Moleiro J, Mendes S, Giestas S, Ministro P, Sousa P, Gonçalves R, Gonçalves B, Oliveira A, Chagas C, Torres J, Dias CC, Lopes J, Borralho P, Afonso J, Geboes K, Carneiro F, Portuguese IBD Study Group [GEDII] F

Accuracy of Faecal Calprotectin and Neutrophil Gelatinase B-associated Lipocalin in Evaluating Subclinical Inflammation in UlceRaTIVE Colitis-the ACERTIVE study. Journal of Crohn's & colitis 11: 435-444, 2017.  [Article] 

 doi: 10.1093/ecco-jcc/jjw170 PMID: 27664275.

 

34. Vasques-Nóvoa F, Laundos TL, Cerqueira RJ, Quina-Rodrigues C, Soares-Dos-Reis R, Baganha F, Ribeiro S, Mendonça L, Gonçalves F, Reguenga C, Verhesen W, Carneiro F, Paiva JA, Schroen B, Castro-Chaves P, Pinto-do-Ó P, Nascimento DS, Heymans S, Leite-Moreira AF, Roncon-Albuquerque R

MicroRNA-155 Amplifies Nitric Oxide/cGMP Signaling and Impairs Vascular Angiotensin II Reactivity in Septic Shock. Critical care medicine 46: e945-e954, 2018.  [Article] 

 doi: 10.1097/CCM.0000000000003296 PMID: 29979224.

 

35. Pimentel-Nunes P, Libânio D, Marcos-Pinto R, Areia M, Leja M, Esposito G, Garrido M, Kikuste I, Megraud F, Matysiak-Budnik T, Annibale B, Dumonceau JM, Barros R, Fléjou JF, Carneiro F, van Hooft JE, Kuipers EJ, Dinis-Ribeiro M

Management of epithelial precancerous conditions and lesions in the stomach (MAPS II): European Society of Gastrointestinal Endoscopy (ESGE), European Helicobacter and Microbiota Study Group (EHMSG), European Society of Pathology (ESP), and Sociedade Portuguesa de Endoscopia Digestiva (SPED) guideline update 2019. Endoscopy 51: 365-388, 2019.  [Article] 

 doi: 10.1055/a-0859-1883 PMID: 30841008.

 

36. Patil P, Cenaj O, Wen XG, Carneiro F, Odze R

Immunohistochemistry Helps Distinguish Signet Ring Cell Carcinoma In-situ from Pseudo-Signet Ring Cells in The Stomach Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 32: ., 2019.  [Meeting Abstract] 

.

 

37. Ferreira RM, Pinto-Ribeiro I, Wen X, Marcos-Pinto R, Dinis-Ribeiro M, Carneiro F, Figueiredo C

Helicobacter pylori cagA Promoter Region Sequences Influence CagA Expression and Interleukin 8 Secretion. The Journal of infectious diseases 213: 669-73, 2016.  [Article] 

 doi: 10.1093/infdis/jiv467 PMID: 26401027.

 

38. Costa AM, Ferreira RM, Pinto-Ribeiro I, Sougleri IS, Oliveira MJ, Carreto L, Santos MA, Sgouras DN, Carneiro F, Leite M, Figueiredo C

Helicobacter pylori Activates Matrix Metalloproteinase 10 in Gastric Epithelial Cells via EGFR and ERK-mediated Pathways. The Journal of infectious diseases 213: 1767-76, 2016.  [Article] 

 doi: 10.1093/infdis/jiw031 PMID: 26802142.

 

39. Spaans LN, Miranda S, Garcia D, Machado JC, Carneiro F

Characterization of the Immune Infiltrate Present in Early and Late Stage Sporadic and Hereditary Neoplastic Lesions of the Colon The Journal of pathology 246:  S40-S40, 2018.  [Meeting Abstract] 

.

 

40. Santos LR, Durães C, Mendes A, Prazeres H, Alvelos MI, Moreira CS, Canedo P, Esteves C, Neves C, Carvalho D, Sobrinho-Simões M, Soares P

A Polymorphism in the Promoter Region of the Selenoprotein S Gene (SEPS1) Contributes to Hashimoto's Thyroiditis Susceptibility. The Journal of clinical endocrinology and metabolism 99: E719-23, 2014.  [Article] 

 doi: 10.1210/jc.2013-3539 PMID: 24471570.

 

41. Magro F, Afonso J, Lopes S, Coelho R, Gonçalves R, Caldeira P, Lago P, de Sousa HT, Ramos J, Gonçalves AR, Ministro P, Rosa I, Vieira AI, Andrade P, Soares JB, Carvalho D, Sousa P, Meira T, Lopes J, Moleiro J, Dias CC, Falcão A, Geboes K, Carneiro F, Portuguese IBD Study Group (GEDII) F

Calprotectin and the Magnitude of Antibodies to Infliximab in Clinically-stable Ulcerative Colitis Patients are More Relevant Than Infliximab Trough Levels and Pharmacokinetics for Therapeutic Escalation. EBioMedicine 21: 123-130, 2017.  [Article] 

 doi: 10.1016/j.ebiom.2017.06.004 PMID: 28629912.

 

42. Fernandes MGO, Jacob M, Martins N, Moura CS, Guimarães S, Reis JP, Justino A, Pina MJ, Cirnes L, Sousa C, Pinto J, Marques JA, Machado JC, Hespanhol V, Costa JL

Targeted Gene Next-Generation Sequencing Panel in Patients with Advanced Lung Adenocarcinoma: Paving the Way for Clinical Implementation. Cancers 11: ., 2019.  [Article] 

 doi: 10.3390/cancers11091229 PMID: 31443496.

 

43. Bastos N, Ruivo CF, da Silva S, Melo SA

Exosomes in cancer: Use them or target them? Seminars in cell & developmental biology 78: 13-21, 2018.  [Review] 

 doi: 10.1016/j.semcdb.2017.08.009 PMID: 28803894.

 

44. Albuquerque A, Pessegueiro Miranda H, Lopes J, Gandara J, Rodrigues S, Gaspar R, Morais R, Ramalho R, Rodrigues-Pinto E, Cardoso H, Barroca H, Dias CC, Carneiro F, Macedo G

Liver transplant recipients have a higher prevalence of anal squamous intraepithelial lesions. British journal of cancer 117: 1761-1767, 2017.  [Article] 

 doi: 10.1038/bjc.2017.370 PMID: 29093575.

 

45. Figueiredo C, Camargo MC, Leite M, Fuentes-Pananá EM, Rabkin CS, Machado JC

Pathogenesis of Gastric Cancer: Genetics and Molecular Classification. Current topics in microbiology and immunology 400: 277-304, 2017.  [Review; Book Chapter] 

 doi: 10.1007/978-3-319-50520-6_12 PMID: 28124158.

 

46. Figueiredo C, Camargo MC, Leite M, Fuentes-Pananá EM, Rabkin CS, Machado JC

Erratum to: Pathogenesis of Gastric Cancer: Genetics and Molecular Classification. Current topics in microbiology and immunology 400: E1, 2017.  [Correction; Book Chapter] 

 doi: 10.1007/978-3-319-50520-6_15 PMID: 28608027.

 

47. Magro F, Lopes SI, Lopes J, Portela F, Cotter J, Lopes S, Moreira MJ, Lago P, Peixe P, Albuquerque A, Rodrigues S, Silva MR, Monteiro P, Lopes C, Monteiro L, Macedo G, Veloso L, Camila C, Afonso J, Geboes K, Carneiro F, Portuguese IBD group [GEDII] F

Histological Outcomes and Predictive Value of Faecal Markers in Moderately to Severely Active Ulcerative Colitis Patients Receiving Infliximab. Journal of Crohn's & colitis 10: 1407-1416, 2016.  [Article] 

 doi: 10.1093/ecco-jcc/jjw112 PMID: 27226417.

 

48. Corso G, Figueiredo J, La Vecchia C, Veronesi P, Pravettoni G, Macis D, Karam R, Lo Gullo R, Provenzano E, Toesca A, Mazzocco K, Carneiro F, Seruca R, Melo S, Schmitt F, Roviello F, De Scalzi AM, Intra M, Feroce I, De Camilli E, Villardita MG, Trentin C, De Lorenzi F, Bonanni B, Galimberti V

Hereditary lobular breast cancer with an emphasis on E-cadherin genetic defect. Journal of medical genetics 55: 431-441, 2018.  [Review] 

 doi: 10.1136/jmedgenet-2018-105337 PMID: 29929997.

 

49. Amorim T, Wyon M, Maia J, Machado JC, Marques F, Metsios GS, Flouris AD, Koutedakis Y

Prevalence of low bone mineral density in female dancers. Sports medicine (Auckland, N.Z.) 45: 257-68, 2015.  [Review] 

 doi: 10.1007/s40279-014-0268-5 PMID: 25281333.

 

50. Mariette C, Carneiro F, Grabsch HI, van der Post RS, Allum W, de Manzoni G, European Chapter of International Gastric Cancer Association G

Consensus on the pathological definition and classification of poorly cohesive gastric carcinoma. Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association 22: 1-9, 2019.  [Article] 

 doi: 10.1007/s10120-018-0868-0 PMID: 30167905.

 

51. Gullo I, Oliveira P, Athelogou M, Gonçalves G, Pinto ML, Carvalho J, Valente A, Pinheiro H, Andrade S, Almeida GM, Huss R, Das K, Tan P, Machado JC, Oliveira C, Carneiro F

New insights into the inflamed tumor immune microenvironment of gastric cancer with lymphoid stroma: from morphology and digital analysis to gene expression. Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association 22: 77-90, 2019.  [Article] 

 doi: 10.1007/s10120-018-0836-8 PMID: 29779068.

 

52. Mariette C, Carneiro F, Grabsch HI, van der Post RS, Allum W, de Manzoni G, European Chapter of International Gastric Cancer Association G

Correction to: Consensus on the pathological definition and classification of poorly cohesive gastric carcinoma. Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association 22: 421, 2019.  [Correction] 

 doi: 10.1007/s10120-019-00925-z PMID: 30631987.

 

53. Barros FM, Carneiro F, Machado JC, Melo SA

Exosomes and Immune Response in Cancer: Friends or Foes? Frontiers in immunology 9: 730, 2018.  [Review] 

 doi: 10.3389/fimmu.2018.00730 PMID: 29696022.

 

54. Lee K, Krempely K, Roberts ME, Anderson MJ, Carneiro F, Chao E, Dixon K, Figueiredo J, Ghosh R, Huntsman D, Kaurah P, Kesserwan C, Landrith T, Li S, Mensenkamp AR, Oliveira C, Pardo C, Pesaran T, Richardson M, Slavin TP, Spurdle AB, Trapp M, Witkowski L, Yi CS, Zhang L, Plon SE, Schrader KA, Karam R

Specifications of the ACMG/AMP variant curation guidelines for the analysis of germline CDH1 sequence variants. Human mutation 39: 1553-1568, 2018.  [Article] 

 doi: 10.1002/humu.23650 PMID: 30311375.

 

55. Bruun J, Sveen A, Barros R, Eide PW, Eilertsen I, Kolberg M, Pellinen T, David L, Svindland A, Kallioniemi O, Guren MG, Nesbakken A, Almeida R, Lothe RA

Prognostic, predictive, and pharmacogenomic assessments of CDX2 refine stratification of colorectal cancer. Molecular oncology 12: 1639-1655, 2018.  [Article] 

 doi: 10.1002/1878-0261.12347 PMID: 29900672.

 

56. Santos M, Pereira PM, Varanda AS, Carvalho J, Azevedo M, Mateus DD, Mendes N, Oliveira P, Trindade F, Pinto MT, Bordeira-Carriço R, Carneiro F, Vitorino R, Oliveira C, Santos MAS

Codon misreading tRNAs promote tumor growth in mice. RNA biology 15: 773-786, 2018.  [Article] 

 doi: 10.1080/15476286.2018.1454244 PMID: 29558247.

 

57. Carneiro P, Moreira AM, Figueiredo J, Barros R, Oliveira P, Fernandes MS, Ferro A, Almeida R, Oliveira C, Carneiro F, Schmitt F, Paredes J, Velho S, Seruca R

S100P is a molecular determinant of E-cadherin function in gastric cancer. Cell communication and signaling : CCS 17: 155, 2019.  [Article] 

 doi: 10.1186/s12964-019-0465-9 PMID: 31767037.

 

58. Companioni O, Bonet C, Muñoz X, Weiderpass E, Panico S, Tumino R, Palli D, Agnoli C, Vineis P, Boutron-Ruault MC, Racine A, Clavel-Chapelon F, Travis RC, Khaw KT, Riboli E, Murphy N, Vergnaud AC, Trichopoulou A, Benetou V, Trichopoulos D, Lund E, Johansen D, Lindkvist B, Johansson M, Sund M, Ardanaz E, Sánchez-Cantalejo E, Huerta JM, Dorronsoro M, Ramón Quirós J, Tjonneland A, Maxild Mortensen L, Overvad K, Chang-Claude J, Rizzato C, Boeing H, de Mesquita HB, Siersema P, Peeters PH, Numans ME, Carneiro F, Licaj I, Freisling H, Sala N, González CA

Polymorphisms of Helicobacter pylori signaling pathway genes and gastric cancer risk in the European prospective investigation into cancer-eurgast cohort. International journal of cancer 134: 92-101, 2014.  [Article] 

 doi: 10.1002/ijc.28357 PMID: 23824692.

 

59. Durães C, Muñoz X, Bonet C, García N, Venceslá A, Carneiro F, Peleteiro B, Lunet N, Barros H, Lindkvist B, Boutron-Ruault MC, Bueno-de-Mesquita HB, Rizzato C, Trichopoulou A, Weiderpass E, Naccarati A, Travis RC, Tjønneland A, Gurrea AB, Johansson M, Riboli E, Figueiredo C, González CA, Capellà G, Machado JC, Sala N

Genetic variants in the IL1A gene region contribute to intestinal-type gastric carcinoma susceptibility in European populations. International journal of cancer 135: 1343-55, 2014.  [Article] 

 doi: 10.1002/ijc.28776 PMID: 24615437.

 

60. Ghezzo MN, Fernandes MT, Pacheco-Leyva I, Rodrigues PM, Machado RS, Araújo MAS, Kalathur RK, Futschik ME, Alves NL, Dos Santos NR

FoxN1-dependent thymic epithelial cells promote T-cell leukemia development. Carcinogenesis 39: 1463-1476, 2018.  [Article] 

 doi: 10.1093/carcin/bgy127 PMID: 30256907.

 

61. Pinto ML, Rios E, Durães C, Ribeiro R, Machado JC, Mantovani A, Barbosa MA, Carneiro F, Oliveira MJ

The Two Faces of Tumor-Associated Macrophages and Their Clinical Significance in Colorectal Cancer. Frontiers in immunology 10: 1875, 2019.  [Article] 

 doi: 10.3389/fimmu.2019.01875 PMID: 31481956.

 

62. Regalo G, Förster S, Resende C, Bauer B, Fleige B, Kemmner W, Schlag PM, Meyer TF, Machado JC, Leutz A

C/EBPß regulates homeostatic and oncogenic gastric cell proliferation. Journal of molecular medicine (Berlin, Germany) 94: 1385-1395, 2016.  [Article] 

 doi: 10.1007/s00109-016-1447-7 PMID: 27522676.

 

63. Vissers LE, Bonetti M, Paardekooper Overman J, Nillesen WM, Frints SG, de Ligt J, Zampino G, Justino A, Machado JC, Schepens M, Brunner HG, Veltman JA, Scheffer H, Gros P, Costa JL, Tartaglia M, van der Burgt I, Yntema HG, den Hertog J

Heterozygous germline mutations in A2ML1 are associated with a disorder clinically related to Noonan syndrome. European journal of human genetics : EJHG 23: 317-24, 2015.  [Article] 

 doi: 10.1038/ejhg.2014.115 PMID: 24939586.

 

64. Justino A, Dias P, João Pina M, Sousa S, Cirnes L, Berta Sousa A, Carlos Machado J, Costa JL

Comprehensive massive parallel DNA sequencing strategy for the genetic diagnosis of the neuro-cardio-facio-cutaneous syndromes. European journal of human genetics : EJHG 23: 347-53, 2015.  [Article] 

 doi: 10.1038/ejhg.2014.97 PMID: 24896146.

 

65. Allum W, Lordick F, Alsina M, Andritsch E, Ba-Ssalamah A, Beishon M, Braga M, Caballero C, Carneiro F, Cassinello F, Dekker JW, Delgado-Bolton R, Haustermans K, Henning G, Hutter B, Lövey J, Netíková IŠ, Obermannová R, Oberst S, Rostoft S, Saarto T, Seufferlein T, Sheth S, Wynter-Blyth V, Costa A, Naredi P

ECCO essential requirements for quality cancer care: Oesophageal and gastric cancer. Critical reviews in oncology/hematology 122: 179-193, 2018.  [Review] 

 doi: 10.1016/j.critrevonc.2017.12.019 PMID: 29458786.

 

66. Azevedo J, Pista A, Lisboa C, Santo I, Azevedo L, Cunha MJ, HERCOLES Study Group MJ

Epidemiology of human papillomavirus on anogenital warts in Portugal - The HERCOLES study. Journal of the European Academy of Dermatology and Venereology : JEADV 31: 1342-1348, 2017.  [Article] 

 doi: 10.1111/jdv.14311 PMID: 28485812.

 

67. Batista IA, Melo SA

Exosomes and the Future of Immunotherapy in Pancreatic Cancer. International journal of molecular sciences 20: ., 2019.  [Review] 

 doi: 10.3390/ijms20030567 PMID: 30699928.

 

68. Pereira C, Guede D, Durães C, Brandão I, Silva N, Passos E, Bernardes M, Monteiro R, Martins MJ

Differential Modulation of Cancellous and Cortical Distal Femur by Fructose and Natural Mineral-Rich Water Consumption in Ovariectomized Female Sprague Dawley Rats Nutrients 11: 2316, 2019.  [Article] 

 doi: 10.3390/nu11102316.

 

69. Magro F, Afonso J, Lopes S, Coelho R, Gonçalves R, Caldeira P, Lago P, de Sousa HT, Ramos J, Gonçalves AR, Ministro P, Rosa I, Meira T, Andrade P, Soares JB, Carvalho D, Sousa P, Vieira AI, Lopes J, Dias CC, Geboes K, Carneiro F

Clinical performance of an infliximab rapid quantification assay. Therapeutic advances in gastroenterology 10: 651-660, 2017.  [Article] 

 doi: 10.1177/1756283X17722916 PMID: 28932267.

 

70. Magro F, Lopes S, Silva M, Coelho R, Portela F, Branquinho D, Correia L, Fernandes S, Cravo M, Caldeira P, Tavares de Sousa H, Patita M, Lago P, Ramos J, Afonso J, Redondo I, Machado P, Philip G, Lopes J, Carneiro F

Soluble human Suppression of Tumorigenicity 2 is associated with endoscopic activity in patients with moderate-to-severe ulcerative colitis treated with golimumab. Therapeutic advances in gastroenterology 12: 1756284819869141, 2019.  [Article] 

 doi: 10.1177/1756284819869141 PMID: 31516554.

 

71. Duarte HO, Gomes J, Machado JC, Reis CA

Gastric cancer: Basic aspects. Helicobacter 23 Suppl 1: e12523, 2018.  [Article; Proceedings Paper] 

 doi: 10.1111/hel.12523 PMID: 30277636.

 

72. Molina-Castro S, Pereira-Marques J, Figueiredo C, Machado JC, Varon C

Gastric cancer: Basic aspects. Helicobacter 1: 22, 2017.  [Article; Proceedings Paper] 

 doi: 10.1111/hel.12412 PMID: 28891129.

 

73. Marques MS, Figueiredo C, Cavadas B, Mendes N, Pereira L, Carneiro F, Leite M

Afadin is a new target of Helicobacter pylori infection that induces epithelial-mesenchymal transition in gastric cells Helicobacter 23: ., 2018.  [Meeting Abstract] 

.

 

74. McNicholl AG, Nyssen OP, Bordin DS, Tepes B, Perez-Aisa A, Vaira D, Caldas M, Bujanda L, Castro-Fernandez M, Lerang F, Leja M, Rodrigo L, Rokkas T, Jonaitis LV, Perez-Lasala J, Shvets O, Gasbarrini A, Simsek H, Axon A, Buzas GM, Machado JC, Niv Y, Boyanova L, Goldis A, Lamy V, Katicic M, Przytulski K, Venerito M, Bytzer P, Milosavljevic T, Fiorini G, Donday MG, Arino I, Capelle LG, Veijola LI, Molina-Infante J, Vologhzanina L, Fadeenko G, O'Morain C, Megraud F, Gisbert JP

Pan-European Registry on H. pylori management (Hp-EuReg): Impact of resistance on efficacy Helicobacter 23: ., 2018.  [Meeting Abstract] 

.

 

75. McNicholl AG, Nyssen OP, Bordin DS, Tepes B, Perez-Aisa A, Vaira D, Caldas M, Bujanda L, Castro-Fernandez M, Lerang F, Leja M, Rodrigo L, Rokkas T, Jonaitis LV, Perez-Lasala J, Shvets O, Gasbarrini A, Simsek H, Axon A, Buzas GM, Machado JC, Niv Y, Boyanova L, Goldis A, Lamy V, Katicic M, Przytulski K, Venerito M, Bytzer P, Milosavljevic T, Fiorini G, Donday MG, Arino I, Capelle LG, Veijola LI, Molina-Infante J, Vologhzanina L, Fadeenko G, Ramas M, Teixeira F, O'Morain C, Gisbert JP

Pan-European Registry on H. pylori management (Hp-EuReg): interim analysis of 16 600 first-line treatments Helicobacter 23: ., 2018.  [Meeting Abstract] 

.

 

76. McNicholl AG, Nyssen OP, Bordin DS, Tepes B, Perez-Aisa A, Vaira D, Caldas M, Bujanda L, Castro-Fernandez M, Lerang F, Leja M, Rodrigo L, Rokkas T, Jonaitis LV, Perez-Lasala J, Shvets O, Gasbarrini A, Simsek H, Axon A, Buzas GM, Machado JC, Niv Y, Boyanova L, Goldis A, Lamy V, Katicic M, Przytulski K, Venerito M, Bytzer P, Milosavljevic T, Fiorini G, Donday MG, Arino I, Capelle LG, Veijola LI, Molina-Infante J, Vologhzanina L, Fadeenko G, Ramas M, Megraud F, O'Morain C, Gisbert JP

Pan-European Registry on H. pylori management (Hp-EuReg): Experience with single capsule bismuth quadruple therapy in 1200 patients Helicobacter 23: ., 2018.  [Meeting Abstract] 

.

 

77. Moutinho-Ribeiro P, Melo S, Macedo G

Glypican-1 circulating exosomes: a promising clue to individualize surveillance of pancreatic cysts? European radiology 28: 3018-3019, 2018.  [Article] 

 doi: 10.1007/s00330-018-5321-6 PMID: 29450714.

 

78. Marques MS, Melo J, Cavadas B, Mendes N, Pereira L, Carneiro F, Figueiredo C, Leite M

Afadin Downregulation by Helicobacter pylori Induces Epithelial to Mesenchymal Transition in Gastric Cells. Frontiers in microbiology 9: 2712, 2018.  [Article] 

 doi: 10.3389/fmicb.2018.02712 PMID: 30473688.

 

79. Figueiredo C, Costa S, Karameris A, Machado JC

Pathogenesis of Gastric Cancer. Helicobacter 20 Suppl 1: 30-5, 2015.  [Article] 

 doi: 10.1111/hel.12254 PMID: 26372822.

 

80. Seabra CL, Nunes C, Gomez-Lazaro M, Correia M, Machado JC, Gonçalves IC, Reis CA, Reis S, Martins MCL

Docosahexaenoic acid loaded lipid nanoparticles with bactericidal activity against Helicobacter pylori. International journal of pharmaceutics 519: 128-137, 2017.  [Article] 

 doi: 10.1016/j.ijpharm.2017.01.014 PMID: 28088639.

 

81. Castro L, Alves S, Chaves SR, Costa JL, Soares P, Preto A

RAF-1 promotes survival of thyroid cancer cells harboring RET/PTC1 rearrangement independently of ERK activation. Molecular and cellular endocrinology 415: 64-75, 2015.  [Article] 

 doi: 10.1016/j.mce.2015.08.006 PMID: 26265449.

 

82. Amorim T, Koutedakis Y, Nevill A, Wyon M, Maia J, Machado JC, Marques F, Metsios GS, Flouris AD, Adubeiro N, Nogueira L, Dimitriou L

Bone mineral density in vocational and professional ballet dancers. Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA 28: 2903-2912, 2017.  [Article] 

 doi: 10.1007/s00198-017-4130-0 PMID: 28656365.

 

83. Bernardes M, Durães C, Oliveira A, Martins MJ, Lucas R, Costa L, Pereira JG, Ramos I, Machado JC, Simões-Ventura F

LRP5 gene polymorphisms and radiographic joint damage in rheumatoid arthritis patients. Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA 29: 2355-2368, 2018.  [Article] 

 doi: 10.1007/s00198-018-4625-3 PMID: 30019084.

 

84. Amorim T, Durães C, Machado JC, Metsios GS, Wyon M, Maia J, Flouris AD, Marques F, Nogueira L, Adubeiro N, Koutedakis Y

Genetic variation in Wnt/ß-catenin and ER signalling pathways in female and male elite dancers and its associations with low bone mineral density: a cross-section and longitudinal study. Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA 29: 2261-2274, 2018.  [Article] 

 doi: 10.1007/s00198-018-4610-x PMID: 29978256.

 

85. Ferreira RM, Machado JC, Letley D, Atherton JC, Pardo ML, Gonzalez CA, Carneiro F, Figueiredo C

Correction for Ferreira et al., A Novel Method for Genotyping the Helicobacter pylori vacA Intermediate Region Directly in Gastric Biopsy Specimens. Journal of clinical microbiology 54: 507, 2016.  [Correction] 

 doi: 10.1128/JCM.03173-15 PMID: 26822771.

 

86. Gullo I, Carvalho J, Martins D, Lemos D, Monteiro AR, Ferreira M, Das K, Tan P, Oliveira C, Carneiro F, Oliveira P

The Transcriptomic Landscape of Gastric Cancer: Insights into Epstein-Barr Virus Infected and Microsatellite Unstable Tumors. International journal of molecular sciences 19: ., 2018.  [Article] 

 doi: 10.3390/ijms19072079 PMID: 30018250.

 

87. Patil P, Cenaj O, Wen XG, Carneiro F, Odze R

Immunohistochemistry Helps Distinguish Signet Ring Cell Carcinoma In-situ from Pseudo-Signet Ring Cells in The Stomach Laboratory investigation; a journal of technical methods and pathology 99: ., 2019.  [Meeting Abstract] 

.

 

88. Garrido L, Nercio T, Leal R, Guimaraes R, Ferro L, Vilarinho L, Costa S, Magalhaes A, Mesquita AS, Pereira AF, Gullo I, Pinheiro H, Sousa S, Carvalho B, Neto AP, Capela L, Teixeira C, Fareleira A, Devezas V, Macedo G, Preto J, Barbosa J, Baptista M, Pinto G, Damasceno M, Fougo JL, Costa-Maia J, Fernandes S, Carneiro F, Castedo S, Oliveira C

Genetic counselling in hereditary diffuse gastric cancer: economical and psycho-social impact European journal of human genetics : EJHG 27: 673-674, 2019.  [Meeting Abstract] 

.

 

89. Garrido L, Nercio T, Leal R, Guimaraes R, Ferro L, Vilarinho L, Costa S, Magalhaes A, Mesquita AS, Pereira AF, Gullo I, Pinheiro H, Sousa S, Carvalho B, Neto AP, Capela L, Teixeira C, Fareleira A, Devezas V, Macedo G, Preto J, Barbosa J, Baptista M, Pinto G, Damasceno M, Fougo JL, Costa-Maia J, Fernandes S, Carneiro F, Castedo S, Oliveira C

Genetic counselling in hereditary diffuse gastric cancer: economical and psycho-social impact European journal of human genetics : EJHG 27:  864-864, 2019.  [Meeting Abstract] 

.

 

90. Garrido L, Leal R, Aguiar A, Seixas S, Ferro L, Vilarinho L, Gullo I, Devezas V, Oliveira R, Fernandes S, Magalhaes A, Baptista M, Carneiro F, Castedo S, Oliveira C

The first CDH1 founder mutation in Portugal: Risk assessment and clinical management European journal of human genetics : EJHG 27: 1787-1787, 2019.  [Meeting Abstract] 

.

 

91. Lisboa C, Santo I, Azevedo J, Azevedo L, Pista A, Dias C, Cunha MJ, Azevedo J, Santo I, Marcelino M, Reis JP, Portelinha AR, Cabral AR, Coutinho MI, Gouveia M, Teixeira VB, Brito C, Fernandes JC, Araujo C, Resende C, Ferreira O, Cardoso J, Fernandes C, Rodrigues A, Laureano A, Fernandes PV, Mestre T, Bartolo E, Matos D, Barreiros H, Alves J, Coelho R, Lisboa C, Moreirta C, Borges-Costa J, Gouveia AI, Teixeira A, Lopes L, Uva L, Azevedo L, Dias CC, Machado JC, Cirnes L, Faustino A, Santos S

High Prevalence of Human Papillomavirus on Anal and Oral Samples from Men and Women with External Anogenital Warts: The HERCOLES Study. Acta dermato-venereologica 99: 557-563, 2019.  [Article] 

 doi: 10.2340/00015555-3136 PMID: 30723872.

 

92. Baldaque-Silva F, Marques M, Andrade AP, Sousa N, Lopes J, Carneiro F, Macedo G

Endoscopic submucosal dissection of gastrointestinal lesions on an outpatient basis. United European gastroenterology journal 7: 326-334, 2019.  [Article] 

 doi: 10.1177/2050640618823874 PMID: 31080617.

 

93. Yang S, Che SP, Kurywchak P, Tavormina JL, Gansmo LB, Correa de Sampaio P, Tachezy M, Bockhorn M, Gebauer F, Haltom AR, Melo SA, LeBleu VS, Kalluri R

Detection of mutant KRAS and TP53 DNA in circulating exosomes from healthy individuals and patients with pancreatic cancer. Cancer biology & therapy 18: 158-165, 2017.  [Article] 

 doi: 10.1080/15384047.2017.1281499 PMID: 28121262.

 

94. McNicholl AG, Nyssen OP, Bordin DS, Tepes B, Perez-Aisa A, Vaira D, Caldas M, Bujanda L, Castro-Fernandez M, Lerang F, Leja M, Rodrigo L, Rokkas T, Kupcinskas L, Perez-Lasala J, Jonaitis LV, Shvets O, Gasbarrini A, Simsek H, Axon ATR, Buzas GM, Machado JC, Niv Y, Boyanova L, Goldis A, Lamy V, Katicic M, Przytulski K, Beglinger C, Venerito M, Bytzer P, Capelle LG, Milosavljevic T, Veijola LI, Molina-Infante J, Vologhzanina L, Fadeenko G, Arino I, Fiorini G, Ramas M, Donday MG, Megraud F, O'Morain C, Gisbert JP

First-line H. pylori eradication therapy in Europe: Results from 21,487 cases of the European Registry on H. pylori Management (Hp-EuReg) Helicobacter 24: ., 2019.  [Meeting Abstract] 

.

 

95. Nyssen OP, Machado J, McNicholl AG, Vaira D, Perez-Aisa A, Tepes B, Bordin DS, Lerang F, Rokkas T, Leja M, Axon A, Kupcinskas L, Jonaitis L, Shvets O, Veijola L, Buzas G, Simsek H, Boyanova L, Lamy V, Niv Y, Venerito M, Bytzer P, Capelle LG, Goldis A, Przytulski K, Beglinger C, Katicic M, Milosavljevic T, Fiorini G, Donday MG, Megraud F, O'Morain C, Gisbert JP

Pan-European Registry on H. pylori management (Hp-EuReg): Analysis of 4,388 second-line treatments Helicobacter 24: ., 2019.  [Meeting Abstract] 

.

 

96. McNicholl AG, Prast-Nielsen S, Andersen LP, Machado JC, Leja M, Alarcon T, Gasbarrini A, Megraud F, O'Morain C, Engstrand L, Gisbert JP

Study of the impact of Helicobacter pylori eradication treatments on the intestinal microbiota Helicobacter 24: ., 2019.  [Meeting Abstract] 

.

 

97. Camargo MC, Figueiredo C, Machado JC

Review: Gastric malignancies: Basic aspects. Helicobacter 24 Suppl 1: e12642, 2019.  [Review] 

 doi: 10.1111/hel.12642 PMID: 31486241.

 

98. McNicholl AG, Nyssen OP, Perez-Aisa A, Vaira D, Tepes B, Caldas M, Bujanda L, Castro-Fernandez M, Rodrigo L, Perez-Lasala J, Garbarrini A, Machado JC, Venerito M, Fiorini G, Ramas M, Donday MG, Megraud F, O'Morain C, Gisbert JP

Pan-European Registry on H. pylori Management (Hp-EuReg): Experience with single capsule bismuth quadruple therapy in 2,326 patients Helicobacter 24: ., 2019.  [Meeting Abstract] 

.

 

99. McNicholl AG, Nyssen OP, Bordin DS, Tepes B, Perez-Aisa A, Vaira D, Caldas M, Bujanda L, Lerang F, Leja M, Rokkas T, Kupcinskas L, Jonaitis LV, Shvets O, Gasbarrini A, Buzas GM, Machado JC, Niv Y, Boyanova L, Lamy V, Venerito M, Katicic M, Capelle LG, Milosavljevic T, Fiorini G, Ramas M, Donday MG, Megraud F, O'Morain C, Gisbert JP

Pan-European Registry on H. pylori Management (Hp-EuReg): First-line treatment use and efficacy trends in 2013-2018 Helicobacter 24: ., 2019.  [Meeting Abstract] 

.

 

100. Vaughn CP, Costa JL, Feilotter HE, Petraroli R, Bagai V, Rachiglio AM, Marino FZ, Tops B, Kurth HM, Sakai K, Mafficini A, Bastien RRL, Reiman A, Le Corre D, Boag A, Crocker S, Bihl M, Hirschmann A, Scarpa A, Machado JC, Blons H, Sheils O, Bramlett K, Ligtenberg MJL, Cree IA, Normanno N, Nishio K, Laurent-Puig P

Simultaneous detection of lung fusions using a multiplex RT-PCR next generation sequencing-based approach: a multi-institutional research study. BMC cancer 18: 828, 2018.  [Article] 

 doi: 10.1186/s12885-018-4736-4 PMID: 30115026.

 

101. Rocha JP, Gullo I, Wen X, Devezas V, Baptista M, Oliveira C, Carneiro F

Pathological features of total gastrectomy specimens from asymptomatic hereditary diffuse gastric cancer patients and implications for clinical management. Histopathology 73: 878-886, 2018.  [Review] 

 doi: 10.1111/his.13715 PMID: 30014492.

 

102. Durães C, Moreira CS, Alvelos I, Mendes A, Santos LR, Machado JC, Melo M, Esteves C, Neves C, Sobrinho-Simões M, Soares P

Polymorphisms in the TNFA and IL6 genes represent risk factors for autoimmune thyroid disease. PloS one 9: e105492, 2014.  [Article] 

 doi: 10.1371/journal.pone.0105492 PMID: 25127106.

 

103. Teixeira AL, Dias F, Ferreira M, Gomes M, Santos JI, Lobo F, Maurício J, Machado JC, Medeiros R

Combined Influence of EGF+61G>A and TGFB+869T>C Functional Polymorphisms in Renal Cell Carcinoma Progression and Overall Survival: The Link to Plasma Circulating MiR-7 and MiR-221/222 Expression. PloS one 10: e0103258, 2014.  [Article] 

 doi: 10.1371/journal.pone.0103258 PMID: 25909813.

 

104. Díaz-Barrera A, Maturana N, Pacheco-Leyva I, Martínez I, Altamirano C

Different responses in the expression of alginases, alginate polymerase and acetylation genes during alginate production by Azotobacter vinelandii under oxygen-controlled conditions. Journal of industrial microbiology & biotechnology 44: 1041-1051, 2017.  [Article] 

 doi: 10.1007/s10295-017-1929-9 PMID: 28246966.

 

105. Van Laethem JL, Carneiro F, Ducreux M, Messman H, Lordick F, Ilson DH, Allum WH, Haustermans K, Lepage C, Matysiak-Budnik T, Cats A, Schmiegel W, Cervantes A, Van Cutsem E, Rougier P, Seufferlein T

The multidisciplinary management of gastro-oesophageal junction tumours: European Society of Digestive Oncology (ESDO): Expert discussion and report from the 16th ESMO World Congress on Gastrointestinal Cancer, Barcelona. Digestive and liver disease : official journal of the Italian Society of Gastroenterology and the Italian Association for the Study of the Liver 48: 1283-1289, 2016.  [Article] 

 doi: 10.1016/j.dld.2016.08.112 PMID: 27590840.

 

106. Dawson H, Novotny A, Becker K, Reim D, Langer R, Gullo I, Svrcek M, Niess JH, Tutuian R, Truninger K, Diamantis I, Blank A, Zlobec I, Riddell RH, Carneiro F, Fléjou JF, Genta RM, Lugli A

Macroscopy predicts tumor progression in gastric cancer: A retrospective patho-historical analysis based on Napoleon Bonaparte's autopsy report. Digestive and liver disease : official journal of the Italian Society of Gastroenterology and the Italian Association for the Study of the Liver 48: 1378-1385, 2016.  [Article] 

 doi: 10.1016/j.dld.2016.07.013 PMID: 27522550.

 

107. Veiga N, Pereira C, Resende C, Amaral O, Ferreira M, Nelas P, Chaves C, Duarte J, Cirnes L, Machado JC, Ferreira P, Correia IJ

Oral and Gastric Helicobacter Pylori: Effects and Associations PloS one 10: ., 2015.  [Article] 

 doi: 10.1371/journal.pone.0126923.

 

108. Pinto-Ribeiro I, Ferreira RM, Batalha S, Hlaing T, Wong SI, Carneiro F, Figueiredo C

Helicobacter pylori vacA Genotypes in Chronic Gastritis and Gastric Carcinoma Patients from Macau, China. Toxins 8: 1, 2016.  [Article] 

 doi: 10.3390/toxins8050142 PMID: 27164143.

 

109. Deans ZC, Costa JL, Cree I, Dequeker E, Edsjö A, Henderson S, Hummel M, Ligtenberg MJ, Loddo M, Machado JC, Marchetti A, Marquis K, Mason J, Normanno N, Rouleau E, Schuuring E, Snelson KM, Thunnissen E, Tops B, Williams G, van Krieken H, Hall JA, IQN Path ASBL JA

Integration of next-generation sequencing in clinical diagnostic molecular pathology laboratories for analysis of solid tumours; an expert opinion on behalf of IQN Path ASBL. Virchows Archiv : an international journal of pathology 470: 5-20, 2017.  [Review] 

 doi: 10.1007/s00428-016-2025-7 PMID: 27678269.

 

110. Da Cruz Paula A, Leitão C, Marques O, Rosa AM, Santos AH, Rêma A, de Fátima Faria M, Rocha A, Costa JL, Lima M, Lopes C

Molecular characterization of CD44+/CD24-/Ck+/CD45-cells in benign and malignant breast lesions. Virchows Archiv : an international journal of pathology 470: 311-322, 2017.  [Article] 

 doi: 10.1007/s00428-017-2068-4 PMID: 28116522.

 

111. Silva J, Canão P, Espinheira MC, Trindade E, Carneiro F, Dias JA

Eosinophils in the gastrointestinal tract: how much is normal? Virchows Archiv : an international journal of pathology 473: 313-320, 2018.  [Article] 

 doi: 10.1007/s00428-018-2405-2 PMID: 29987614.

 

112. Mata S, Rosa I, Silva P, Magro F, Carneiro F, Peixoto A, Silva M, Sousa HT, Roseira J, Parra J, Barosa R, Vieira A, Brito MJ, Lago P, Coelho A, Moleiro J, da Silva JP, Fonseca R, Albuquerque C, Pereirta AD

Methylation patterns in dysplasia in inflammatory bowel disease patients Virchows Archiv 475: S53-S54, 2019.  [Meeting Abstract] 

.

 

113. Garcia D, Gullo I, Spaans L, Miranda S, Reis J, Costa JL, Carneiro F, Machado JC

The influence of the genetic and immunologic context in the development of colorectal adenoma Virchows Archiv 475: S200-S200, 2019.  [Meeting Abstract] 

.

 

114. Pfarr N, Costa J, Bellosillo B, Fenizia F, Dinjens W, Alborelli I, Heydt C, Jansen MP, Machado JC, Vollbrecht C, Merkelbach-Bruse S, van Marion R, Hummel M, Chaudhary R, Allen C, Normanno N

Testing the feasibility of tumour mutation burden using the Oncomine Tumour Mutation Load Assay - Data from eight sites of the Immuno Oncology Consortia Virchows Archiv 475: S104-S105, 2019.  [Meeting Abstract] 

.

 

115. Amorim T, Metsios GS, Wyon M, Nevill AM, Flouris AD, Maia J, Teixeira E, Machado JC, Marques F, Koutedakis Y

Bone mass of female dance students prior to professional dance training: A cross-sectional study. PloS one 12: e0180639, 2017.  [Article] 

 doi: 10.1371/journal.pone.0180639 PMID: 28678833.

 

116. Costa Pereira C, Durães C, Coelho R, Grácio D, Silva M, Peixoto A, Lago P, Pereira M, Catarino T, Pinho S, Teixeira JP, Macedo G, Annese V, Magro F

Association between Polymorphisms in Antioxidant Genes and Inflammatory Bowel Disease. PloS one 12: e0169102, 2017.  [Article] 

 doi: 10.1371/journal.pone.0169102 PMID: 28052094.

 

117. Mesquita P, Freire AF, Lopes N, Gomes R, Azevedo D, Barros R, Pereira B, Cavadas B, Pópulo H, Boaventura P, David L, Pereira L, Almeida R

Expression and Clinical Relevance of SOX9 in Gastric Cancer. Disease markers 2019: 8267021, 2019.  [Article] 

 doi: 10.1155/2019/8267021 PMID: 31275454.

 

118. Fernandes MT, Caroço LS, Pacheco-Leyva I, Dos Santos NR

NF-¿B-dependent RANKL expression in a mouse model of immature T-cell leukemia. Biochemical and biophysical research communications 510: 272-277, 2019.  [Article] 

 doi: 10.1016/j.bbrc.2019.01.089 PMID: 30711250.

 

119. Spoto CPE, Gullo I, Carneiro F, Montgomery EA, Brosens LAA

Hereditary gastrointestinal carcinomas and their precursors: An algorithm for genetic testing. Seminars in diagnostic pathology 35: 170-183, 2018.  [Review] 

 doi: 10.1053/j.semdp.2018.01.004 PMID: 29397239.

 

120. Durães C, Almeida GM, Seruca R, Oliveira C, Carneiro F

Biomarkers for gastric cancer: prognostic, predictive or targets of therapy? Virchows Archiv : an international journal of pathology 464: 367-78, 2014.  [Review] 

 doi: 10.1007/s00428-013-1533-y PMID: 24487788.

 

121. Aguiar F, Fernandes G, Queiroga H, Machado JC, Cirnes L, Souto Moura C, Hespanhol V

Overall Survival Analysis and Characterization of an EGFR Mutated Non-Small Cell Lung Cancer (NSCLC) Population. Archivos de bronconeumologia 54: 10-17, 2018.  [Article] 

 doi: 10.1016/j.arbres.2017.07.012 PMID: 29079040.

 

122. Queirós P, Pinheiro H, Carvalho J, Oliveira P, Gullo I, Carneiro F, Almeida GM, Oliveira C

KRAS mutations in microsatellite instable gastric tumours: impact of targeted treatment and intratumoural heterogeneity. Virchows Archiv : an international journal of pathology 467: 383-92, 2015.  [Article] 

 doi: 10.1007/s00428-015-1823-7 PMID: 26318594.

 

123. Boaventura P, Durães C, Mendes A, Costa NR, Chora I, Ferreira S, Araújo E, Lopes P, Rosa G, Marques P, Tavares S, Chaves V, Bettencourt P, Oliveira I, Costa F, Ramos I, Teles MJ, Guimarães JT, Sobrinho-Simões M, Soares P

Is Low-Dose Radiation Exposure a Risk Factor for Atherosclerotic Disease? Radiation research 189: 418-424, 2018.  [Article] 

 doi: 10.1667/RR14942.1 PMID: 29461943.

 

124. Oliveira J, Gonçalves A, Taipa R, Melo-Pires M, Oliveira ME, Costa JL, Machado JC, Medeiros E, Coelho T, Santos M, Santos R, Sousa M

New massive parallel sequencing approach improves the genetic characterization of congenital myopathies. Journal of human genetics 61: 497-505, 2016.  [Article] 

 doi: 10.1038/jhg.2016.2 PMID: 26841830.

 

125. Silva M, Melo S

Non-coding RNAs in Exosomes: New Players in Cancer Biology Current genomics 16: 1, 2015.  [Article] 

 doi: 10.2174/1389202916666150707154719 PMID: 27047249.

 

126. Vaz D, Conde S, Tente D, Machado JC, Barroso A

Role of epidermal growth factor mutational status for distinction between recurrent lung cancer and second primary lung cancer: case report. The clinical respiratory journal 11: 854-858, 2017.  [Article] 

 doi: 10.1111/crj.12427 PMID: 26663872.

 

127. van der Post RS, Oliveira C, Guilford P, Carneiro F

Hereditary gastric cancer: what's new? Update 2013-2018. Familial cancer 18: 363-367, 2019.  [Review] 

 doi: 10.1007/s10689-019-00127-7 PMID: 30989426.

 

128. Rodrigues JP, David L, Almeida R, Barros R, Freitas T, Silva J, Ponte A, Sousa M, Silva JC, Carvalho J

Mechanisms of regulation of normal and metaplastic intestinal differentiation. Histology and histopathology 33: 523-532, 2018.  [Review] 

 doi: 10.14670/HH-11-938 PMID: 29027178.

 

129. van der Post RS, Gullo I, Oliveira C, Tang LH, Grabsch HI, O'Donovan M, Fitzgerald RC, van Krieken H, Carneiro F

Histopathological, Molecular, and Genetic Profile of Hereditary Diffuse Gastric Cancer: Current Knowledge and Challenges for the Future. Advances in Experimental Medicine and Biology 908: 371-91, 2016.  [Article; Book Chapter] 

 doi: 10.1007/978-3-319-41388-4_18 PMID: 27573781.

 

130. Marques J, Neto SJ, Pinheiro J, Machado JC, Costa JL

Induction of apoptosis increases the sensitivity of detection of relevant mutations in circulation Medicine 98: ., 2019.  [Meeting Abstract] 

.

 

131. Reis J, Fernandes G, Hespanhol V, Machado JC, Costa JL

Liquid biopsy: looking beyond EGFR mutations Medicine 98: ., 2019.  [Meeting Abstract] 

.

 

132. Neto SJ, Marques J, Rad R, Melo SA, Machado JC, Costa JL

Horizontal transmission of mutation-driven drug resistance in cancer Medicine 98: ., 2019.  [Meeting Abstract] 

.

 

133. Wahaia F, Kasalynas I, Seliuta D, Molis G, Urbanowicz A, Carvalho Silva CD, Carneiro F, Valusis G, Granja P

Study of paraffin-embedded colon cancer tissue using terahertz spectroscopy Journal of Molecular Structure  448-453, 2015.  [Article] 

 doi: 10.1016/j.molstruc.2014.09.024.

 

134. Wahaia F, Kasalynas I, Seliuta D, Molis G, Urbanowicz A, Silva CDC, Carneiro F, Valusis G, Granja PL

Terahertz spectroscopy for the study of paraffin-embedded gastric cancer samples Journal of Molecular Structure 1079: 391-395, 2015.  [Article] 

 doi: 10.1016/j.molstruc.2014.09.002.

 

135. Wahaia F, Kasalynas I, Venckevicius R, Seliuta D, Valusis G, Urbanowicz A, Molis G, Carneiro F, Carvalho Silva CD, Granja PL

Terahertz absorption and reflection imaging of carcinoma-affected colon tissues embedded in paraffin Journal of Molecular Structure  214-219, 2016.  [Article] 

 doi: 10.1016/j.molstruc.2015.11.048.

 

136. Coelho R, Gonçalves R, Carneiro F, Fernandes M, Lopes J, Guimarães S, Macedo G

 Pigmented hepatocellular adenoma with ß-catenin activation: case report and literature review. Annals of hepatology 15: 598-603, 2016.  [Review] 

 PMID: 27236161.

 

137. Gullo I, Carneiro F, Oliveira C, Almeida GM

Heterogeneity in Gastric Cancer: From Pure Morphology to Molecular Classifications. Pathobiology : journal of immunopathology, molecular and cellular biology 85: 50-63, 2018.  [Article] 

 doi: 10.1159/000473881 PMID: 28618420.

 

138. Junqueira-Neto S, Batista IA, Costa JL, Melo SA

Liquid Biopsy beyond Circulating Tumor Cells and Cell-Free DNA. Acta cytologica 63: 479-488, 2019.  [Review] 

 doi: 10.1159/000493969 PMID: 30783027.

 

139. Fernandes Marques J, Pereira Reis J, Fernandes G, Hespanhol V, Machado JC, Costa JL

Circulating Tumor DNA: A Step into the Future of Cancer Management. Acta cytologica 63: 456-465, 2019.  [Review] 

 doi: 10.1159/000492917 PMID: 30852572.

 

140. Costa JL, Schmitt FC

Liquid Biopsy: A New Tool in Oncology. Acta cytologica 63: 448, 2019.  [Editorial Material] 

 doi: 10.1159/000501355 PMID: 31266005.

 

141. Barranha R, Costa JL, Carneiro F, Machado JC

Genetic heterogeneity in colorectal cancer and its clinical implications Acta medica portuguesa  370-375, 2015.  [Article] 

.

 

142. Pereira CD, Passos E, Severo M, Vitó I, Wen X, Carneiro F, Gomes P, Monteiro R, Martins MJ

Ingestion of a natural mineral-rich water in an animal model of metabolic syndrome: effects in insulin signalling and endoplasmic reticulum stress. Hormone molecular biology and clinical investigation 26: 135-50, 2016.  [Article] 

 doi: 10.1515/hmbci-2015-0033 PMID: 26741353.

 

143. Van der Post C, Carneiro F

Signet Ring Cell Carcinoma Pathology of the Gastrointestinal Tract  636-641, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1681.

 

144. Van der Post C, Carneiro F

Chronic Gastritis Pathology of the Gastrointestinal Tract  132-137, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1610.

 

145. Silva R, Gullo I, Carneiro F

The PD-1:PD-L1 immune inhibitory checkpoint in Helicobacter pylori infection and gastric cancer: a comprehensive review and future perspectives Porto Biomedical Journal  4-11, 2016.  [] 

 doi: 10.1016/j.pbj.2016.03.004.

 

146. Henriques-Coelho T, Carneiro F

Esophageal Atresia Pathology of the Gastrointestinal Tract  235-237, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_2877.

 

147. Van der Post C, Carneiro F

Gastric Stump Pathology of the Gastrointestinal Tract  281-284, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1605.

 

148. Van der Post C, Carneiro F

Hyperplastic Polyps (Stomach) Pathology of the Gastrointestinal Tract  353-358, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1636.

 

149. Van der Post C, Carneiro F

Mucinous Carcinoma, Upper Gastrointestinal Tract Pathology of the Gastrointestinal Tract  505-508, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1654.

 

150. Van der Post C, Carneiro F

E-Cadherin, Hereditary Diffuse Gastric Cancer Pathology of the Gastrointestinal Tract  213-218, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1586.

 

151. van der Post RS, Carneiro F

Emerging Concepts in Gastric Neoplasia: Heritable Gastric Cancers and Polyposis Disorders. Surgical pathology clinics 10: 931-945, 2017.  [] 

 doi: 10.1016/j.path.2017.07.011 PMID: 29103540.

 

152. van der Post C, Carneiro F

Acute Gastritis Pathology of the Gastrointestinal Tract  12-17, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1607.

 

153. Van der Post C, Carneiro F

Adenocarcinoma, Upper Gastrointestinal Tract Pathology of the Gastrointestinal Tract  19-29, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1554.

 

154. Van der Post C, Carneiro F

Adenoma, Upper Gastrointestinal Tract Pathology of the Gastrointestinal Tract  35-38, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1557.

 

155. Van der Post C, Carneiro F

Gastritis Cystica Polyposa/Profunda Pathology of the Gastrointestinal Tract  286-288, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1606.

 

156. Vilas-Boas F, Baldaque-Silva F, Carneiro F, Macedo G

Pyloric Stenosis Pathology of the Gastrointestinal Tract  605-608, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1676.

 

157. Van der Post C, Carneiro F

Fundic Gland Polyp Pathology of the Gastrointestinal Tract  251-255, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1602.

 

158. Cipriano MA, Carneiro F

O papel da biopsia nos tumores do fígado Carcinoma Hepatocelular  41-48, 2017.  [] 

.

 

159. Van der Post C, Carneiro F

Tubular Adenocarcinoma Pathology of the Gastrointestinal Tract  659-662, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1687.

 

160. Van der Post C, Carneiro F

Goblet Cells Pathology of the Gastrointestinal Tract  316-319, 2017.  [] 

 doi: 10.1007/978-3-319-40560-5_1626.